The table below provides information about proteins whose structures have been determined by solid-state NMR, to a resolution sufficient to have resulted in a file deposited with the worldwide Protein Data Bank (wwPDB). Here is the NMR page of the wwPDB.

Please help me to keep this table up to date by sending me missing information at: dror.warschawski_at_ibpc.fr

Last database update : 8 April 2015

Unique proteins in database : 42

Number of coordinate files in database : 76

For more membrane protein structures: determined by NMR

ALIGNABLE SOLUBLE PROTEINS
MICRO-CRYSTALLINE SOLUBLE PROTEINS
PROTEINS FORMING FIBRILS
MEMBRANE PROTEINS IN MEMBRANES
MICRO-CRYSTALLINE MEMBRANE PROTEINS
OTHER PROTEINS


 
Protein

PDB

Entry

BMRB

Entry

Oligomer

Size/State

Production

Source

Reconstitution

Medium

NMR

Method

PubMed

Reference

ALIGNABLE SOLUBLE PROTEINS
fd coat protein in filamentous bacteriophage
5 kDa/1
Escherichia coli -
oriented
Zeri et al. (2003)
Pf1 coat protein in filamentous bacteriophage (at various temperatures) 5 kDa/1
Pseudomonas aeruginosa
-
oriented
Thiriot et al. (2004)
Thiriot et al. (2004)
Strauss et al. (2011)

MICRO-CRYSTALLINE SOLUBLE PROTEINS
Spectrin SH3 domain
1M8M

7 kDa/1 Escherichia coli -
MAS
Castellani et al. (2002)
Kaliotoxin

1XSW

4 kDa/1 Escherichia coli -
MAS

Lange et al. (2005)

beta1 immunoglobulin binding domain of protein G (GB1)
2JU6
2JSV
2K0P
2KQ4
2KWD
2LGI

6 kDa/1 Escherichia coli -
MAS
Zhou et al. (2007) 
Franks et al. (2008)
Robustelli et al. (2008)
Nieuwkoop et al. (2009)
Nieuwkoop and Rienstra (2010)
Wylie et al. (2011)
Crh domain, swapped dimer 2RLZ
19 kDa/2 Escherichia coli -
MAS
Loquet et al. (2008)
Ubiquitin
2JZZ
2L3Z

9 kDa/1 Escherichia coli -
MAS
Manolikas et al. (2008)
Huber et al. (2011)
MMP-12 (Macrophage metalloelastase)
2K9C
2KRJ
17 kDa/1 Escherichia coli -
MAS
Balayssac et al. (2008)
Bertini et al. (2010)
Cu(I),Zn(II) superoxide dismutase 16 kDa/1
Escherichia coli-
MAS
Knight et al. (2012)
Cap-Gly domain of mammalian dynactin 10 kDa/1
Escherichia coli-
MAS
Yan et al. (2013)
 
PROTEINS FORMING FIBRILS
Transthyretin amyloid fibrils 1RVS

1 kDa/1
synthetic -
MAS
Jaroniec et al. (2004)
Transthyretin (105-115) amyloid fibrils
Protofilament, Doublet, Triplet and Quadruplet


2M5N
2M5K
2M5M
3ZPK
19 kDa/16
10 kDa/8
14 kDa/12
19 kDa/16
synthetic
-
MAS
Fitzpatrick et al. (2013)
Amyloid protofilaments of beta2-microglobulin fragment
2E8D
10 kDa/4 Escherichia coli -
MAS
Iwata et al. (2006)
WW domain of human amyloid CA 150
2NNT

18 kDa/4 Escherichia coli -
MAS
Ferguson et al. (2006)
Beta-amyloid protein 40 2LMN
2LMO
2LMP
2LMQ
2M4J
52 kDa/12
78 kDa/18

39 kDa/9
synthetic

human
-
MAS
Petkova et al. (2006)
Paravastu et al. (2008)
Lu et al. (2013)
Beta-amyloid protein 40 bearing the Osaka mutation
2MVX
42 kDa/10
Escherichia coli
-
MAS
Schutz et al. (2014)
Amyloid fibrils of the HET-s (218-289) prion

with small molecule Congo Red
2RNM
2KJ3
2LBU
43 kDa/5 Escherichia coli -
MAS
Wasmer et al. (2008)
Van Melckebeke et al. (2010)
Schutz et al. (2011)
Fragment of the human islet amyloid polypeptide (hIAPP)
2KIB
6 kDa/8
synthetic
-
MAS
Nielsen et al. (2009)
Type-III Secretion System Needle
(from Salmonella typhimurium)
2LPZ
257 kDa/29
Escherichia coli -
MAS
Loquet et al. (2012)
Type-III Secretion System Needle - tetrameric building block
(from Salmonella typhimurium)
2MEX
35 kDa/4
Escherichia coli -
MAS
Loquet et al. (2013)
Type-III Secretion System Needle
(from Shigella flexneri)
2MME
272 kDa/29
Escherichia coli -
MAS and EM
Demers et al. (2014)
Capsid protein G8P of M13 bacteriophage
2MJZ
184 kDa/35
Escherichia coli -
MAS
Morag et al. (2015)
 
MEMBRANE PROTEINS IN MEMBRANES

4 kDa/2
synthetic lipids
oriented
Ketchem et al. (1993)
AchR M2 channel

3 kDa/1
Escherichia coli lipids
oriented
Opella et al. (1999)

2 kDa/1
synthetic lipids
oriented
Valentine et al. (2001)

11 kDa/4
synthetic lipids
oriented
Wang et al. (2001)

Influenza M2 channel
residues 22-46
with amantadine

2H95   8 kDa/4 synthetic lipids
oriented
Hu et al. (2007)

Influenza M2 channel
residues 22-46
with amantadine

11 kDa/4
synthetic lipids
MAS and oriented
Cady et al. (2009)
Cady et al. (2010)

Influenza M2 channel
residues 22-62


20 kDa/4
Escherichia coli
lipids
oriented
Sharma et al. (2010)
5 kDa/1
Escherichia coli lipids
oriented
Marassi and Opella (2003)

4 kDa/1
Escherichia coli lipids
oriented
Park et al. (2003)

Stannin

14 kDa/1
Escherichia coli
SDS
solution and oriented
Integral membrane domain of the mercury transporter Mer F 2H3O

2LJ2

17914
6 kDa/1
Escherichia coli (C43)
bicelles

DMPC
oriented bicelles

MAS
De Angelis et al. (2006)

Das et al (2012)
Full length mercury transporter Mer F
2M67
2MOZ
19115 9 kDa/1
Escherichia colibicelles and DMPC
oriented and MAS
Lu et al (2013) Tian et al (2014)

Protegrin-1

1ZY6   4 kDa/2
synthetic POPC
MAS
Mani et al. (2006)

Mastoparan

(membrane bound rather than transmembrane)

2CZP10001
2 kDa
Escherichia coliDPPC:DPPG=4:1
MAS
Todokoro et al. (2006)

human Phospholamban

2KB7
2KYV
  30 kDa/5 Escherichia coli DPC and lipids solution, oriented and MAS Traaseth et al. (2009)
Verardi et al. (2011)
Pf1 coat protein
5 kDa/1
Pseudomonas aeruginosa
DHPC, bicelles and lipids
solution and oriented
Park et al. (2010)

G-protein coupled chemokine receptor CXCR1

2LNL
18170 34 kDa/1Escherichia coliDMPC
MASPark et al. (2012)

N-terminal domain Htt17 of Huntingtin

(membrane bound rather than transmembrane)

2LD2
2 kDa/1syntheticPOPC on glass plates
and DPC micelles
oriented and solution
Michalek et al. (2013)
Rabbit cytochrome b5

2M33
18919 13 kDa/1Escherichia coliDPC and bicelles solution and oriented
Ahuja et al. (2013)

Anabaena Sensory Rhodopsin

2M3G
83 kDa/3Escherichia colilipids (DMPC/DMPA:9/1)
MASWang et al. (2013)

Salmonella Transmembrane Regulatory Peptide, MgtR

2MC7
19334 3 kDa/1SyntheticDMPC (37°C) oriented
Jean-François et al. (2014)
Moronecidin
2MCU
19454 3 kDa/1SyntheticDMPC/DMPG bilayer (40°C) oriented
Perrin et al. (2014)

Moronecidin
2MCV
19455 3 kDa/1SyntheticPOPE/POPG bilayer (22°C) oriented
Perrin et al. (2014)
Piscidin-3
2MCW
19456 2 kDa/1SyntheticDMPC/DMPG bilayer (40°C) oriented
Perrin et al. (2014)

Piscidin-3
2MCX
19457 2 kDa/1SyntheticPOPE/POPG bilayer (22°C) oriented
Perrin et al. (2014)

MICRO-CRYSTALLINE MEMBRANE PROTEINS
human alpha-defensin HNP-1
3 kDa/1
Escherichia colimicrocrystalised outside the lipid membraneMAS
Zhang et al. (2009)
Membrane protein complex DsbB-DsbA (with ubiquinone) 42 kDa/1
Escherichia coli (C43)
microcrystalised outside the lipid membrane with residual native lipids MAS and X-ray
Tang et al. (2011)
DsbB
(
C41S mutant)
18 kDa/1
Escherichia colimicrocrystalised outside the lipid membrane with residual native lipids MAS and X-ray
Tang et al. (2013)
Membrane anchor domain of the trimeric autotransporter YadA

34 kDa/3

Escherichia coli

microcrystalised outside the lipid membrane

MAS








OTHER PROTEINS
alpha-B crystallin
40 kDa/2
Escherichia coli-
MAS
Jehle et al. (2010)
L,D-transpeptidase YkuD + peptidoglycan hexamuropeptide
19 kDa/1 + 6 kDa/6
Escherichia coli + Bacillus subtilis-
MAS
Schanda et al. (2014)