Last database update : 12 June 2008

Unique proteins in database : 9

Number of coordinate files in database : 10

For membrane protein structures: determined by NMR

 
Protein PDB Code BMRB Entry Get File Get Image Reference
(links are to PubMed)
MICRO-CRYSTALLINE PROTEINS
Crh domain, swapped dimer

2RLZ

Loquet et al. (2008)
Spectrin SH3 domain
 1M8M



Castellani et al. (2002)
Ubiquitin
 2JZZ



Manolikas et al. (2008)
beta1 immunoglobulin binding domain of protein G (GB1)
 2JU6 and 2JSV
 and
and

Zhou et al. (2007) and Franks et al. (2008)
Kaliotoxin
 1XSW

Lange et al. (2005)
PROTEINS FORMING FIBRILS
Transthyretin in amyloid fibrils 1RVS



Jaroniec et al. (2004)
Amyloid protofilaments of beta2-microglobulin fragment
 2E8D
Iwata et al. (2006)
WW domain of CA 150
 2NNT



Ferguson et al. (2006)
Amyloid fibrils of the HET-s (218-289) prion
 2RNM

Wasmer et al. (2008)

Description of Table

The table above provides information about proteins (except for membrane proteins) whose structures have been determined by solid-state NMR, to a resolution sufficient to have resulted in a file deposited at the RCSB Protein Data Bank.

References

Castellani, F., Van Rossum, B., Diehl, A., Schubert, M., Rehbein, K., Oschkinat, H. (2002) Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy Nature 420: 98-102

Ferguson, N., Becker, J., Tidow, H., Tremmel, S., Sharpe, T.D., Krause, G., Flinders, J., Petrovich, M., Berriman, J., Oschkinat, H., Fersht, A.R. (2006) General structural motifs of amyloid protofilaments. Proc.Natl.Acad.Sci.Usa 103: 16248-16253

Franks, W.T., Wylie, B.J., Schmidt, H.L., Nieuwkoop, A.J., Mayrhofer, R.M., Shah, G.J., Graesser, D.T., Rienstra, C.M. (2008) Dipole tensor-based atomic-resolution structure determination of a nanocrystalline protein by solid-state NMR Proc.Natl.Acad.Sci.Usa 105: 4621-4626

Iwata, K., Fujiwara, T., Matsuki, Y., Akutsu, H., Takahashi, S., Naiki, H., Goto, Y. (2006) 3D structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR Proc.Natl.Acad.Sci.Usa 103: 18119-18124

Jaroniec, C.P., MacPhee, C.E., Bajaj, V.S., McMahon, M.T., Dobson, C.M., Griffin, R.G. (2004) High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy Proc.Natl.Acad.Sci.USA 101: 711-716

Lange, A., Becker, S., Seidel, K., Giller, K., Pongs, O., Baldus, M. (2005) A Concept for Rapid Protein-Structure Determination by Solid-State NMR Spectroscopy Angew.Chem.Int.Ed.Engl. 44: 2089-2092

Loquet, A., Bardiaux, B., Gardiennet, C., Blanchet, C., Baldus, M., Nilges, M., Malliavin, T., Bockmann, A. (2008) 3D structure determination of the Crh protein from highly ambiguous solid-state NMR restraints. J.Am.Chem.Soc. 130: 3579-3589

Manolikas, T., Herrmann, T., Meier, B.H. (2008) Protein structure determination from 13C spin-diffusion solid-state NMR spectroscopy. J.Am.Chem.Soc. 130: 3959-3966

Wasmer, C., Lange, A., Van Melckebeke, H., Siemer, A.B., Riek, R., Meier, B.H. (2008) Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core Science 319: 1523-1526

Zhou, D.H., Shea, J.J., Nieuwkoop, A.J., Franks, W.T., Wylie, B.J., Mullen, C., Sandoz, D., Rienstra, C.M. (2007) Solid-State Protein-Structure Determination with Proton-Detected Triple-Resonance 3D Magic-Angle-Spinning NMR Spectroscopy. Angew.Chem.Int.Ed.Engl. 46: 8380-8383