Last database update : 12 June 2008
Unique proteins in database : 9
Number of coordinate files in database : 10
For membrane protein structures: determined by NMR
| Protein | PDB Code | BMRB Entry | Get File | Get Image | Reference (links are to PubMed) |
|---|---|---|---|---|---|
| MICRO-CRYSTALLINE
PROTEINS |
|||||
| Crh domain, swapped dimer | ![]() |
![]() |
Loquet
et al. (2008) |
||
| Spectrin
SH3 domain |
1M8M |
![]() |
![]() |
Castellani
et al. (2002) |
|
| Ubiquitin |
2JZZ |
![]() |
![]() |
Manolikas
et al. (2008) |
|
| beta1 immunoglobulin binding domain of protein G (GB1) |
2JU6 and 2JSV |
and ![]() |
and |
||
| Kaliotoxin |
1XSW |
![]() |
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||
| PROTEINS
FORMING
FIBRILS |
|||||
| Transthyretin in amyloid fibrils | 1RVS |
![]() |
![]() |
Jaroniec
et al. (2004) |
|
| Amyloid
protofilaments of beta2-microglobulin fragment |
2E8D |
![]() |
![]() |
Iwata et
al. (2006) |
|
| WW domain of CA 150 |
2NNT |
![]() |
![]() |
Ferguson et
al. (2006) |
|
| Amyloid fibrils of the HET-s (218-289) prion |
2RNM |
![]() |
![]() |
Wasmer
et al. (2008) |
|
The table above provides information about proteins (except for membrane proteins) whose structures have been determined by solid-state NMR, to a resolution sufficient to have resulted in a file deposited at the RCSB Protein Data Bank.
Castellani, F., Van Rossum, B., Diehl, A., Schubert, M., Rehbein, K., Oschkinat, H. (2002) Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy Nature 420: 98-102
Ferguson, N., Becker, J., Tidow, H., Tremmel, S., Sharpe, T.D., Krause, G., Flinders, J., Petrovich, M., Berriman, J., Oschkinat, H., Fersht, A.R. (2006) General structural motifs of amyloid protofilaments. Proc.Natl.Acad.Sci.Usa 103: 16248-16253
Franks, W.T., Wylie, B.J., Schmidt, H.L., Nieuwkoop, A.J., Mayrhofer, R.M., Shah, G.J., Graesser, D.T., Rienstra, C.M. (2008) Dipole tensor-based atomic-resolution structure determination of a nanocrystalline protein by solid-state NMR Proc.Natl.Acad.Sci.Usa 105: 4621-4626
Iwata, K., Fujiwara, T., Matsuki, Y., Akutsu, H., Takahashi, S., Naiki, H., Goto, Y. (2006) 3D structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR Proc.Natl.Acad.Sci.Usa 103: 18119-18124
Jaroniec, C.P., MacPhee, C.E., Bajaj, V.S., McMahon, M.T., Dobson, C.M., Griffin, R.G. (2004) High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy Proc.Natl.Acad.Sci.USA 101: 711-716
Lange, A., Becker, S., Seidel, K., Giller, K., Pongs, O., Baldus, M. (2005) A Concept for Rapid Protein-Structure Determination by Solid-State NMR Spectroscopy Angew.Chem.Int.Ed.Engl. 44: 2089-2092
Loquet, A., Bardiaux, B., Gardiennet, C., Blanchet, C., Baldus, M., Nilges, M., Malliavin, T., Bockmann, A. (2008) 3D structure determination of the Crh protein from highly ambiguous solid-state NMR restraints. J.Am.Chem.Soc. 130: 3579-3589
Manolikas, T., Herrmann, T., Meier, B.H. (2008) Protein structure determination from 13C spin-diffusion solid-state NMR spectroscopy. J.Am.Chem.Soc. 130: 3959-3966
Wasmer, C., Lange, A., Van Melckebeke, H., Siemer, A.B., Riek, R., Meier, B.H. (2008) Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core Science 319: 1523-1526
Zhou, D.H., Shea, J.J., Nieuwkoop, A.J., Franks, W.T., Wylie, B.J., Mullen, C., Sandoz, D., Rienstra, C.M. (2007) Solid-State Protein-Structure Determination with Proton-Detected Triple-Resonance 3D Magic-Angle-Spinning NMR Spectroscopy. Angew.Chem.Int.Ed.Engl. 46: 8380-8383